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Agent Skills Guide

scvi-tools

published 2026/01/18

This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use this skill for probabilistic modeling, batch correction, dimensionality reduction, differential expression, cell type annotation, multimodal integration, and spatial analysis tasks.

📦 Install Skill

Command line install

Install directly with the `skills` CLI.

npx skills add davila7/claude-code-templates/cli-tool/components/skills/scientific/scvi-tools

Local download

Download only this skill directory.

Download scvi-tools only
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