cbioportal-database
•published 2026/03/13
Access TCGA and other cancer genomics datasets via cBioPortal REST API. Retrieve somatic mutations, copy number alterations, gene expression profiles, and clinical data (survival, stage, treatment) for thousands of cancer studies. Use for tumor mutation burden analysis, oncoprint queries, and survival analysis. For population variant frequencies use gnomad-database; for drug-gene interactions use dgidb-database.
📦 Install Skill
Command line install
Install directly with the `skills` CLI.
npx skills add jaechang-hits/SciAgent-Skills/skills/genomics-bioinformatics/cbioportal-databaseFile Explorer
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