spikeinterface-electrophysiology
•published 2026/03/13
Unified Python framework for extracellular electrophysiology. Load recordings from 20+ formats (SpikeGLX, OpenEphys, NWB, Intan, Maxwell, Blackrock), preprocess signals, run 10+ spike sorters (Kilosort4, SpykingCircus2, Tridesclous, MountainSort5) with a single API, compute quality metrics (SNR, ISI violations, firing rate, amplitude cutoff), compare sorter outputs, and export to NWB or Phy. Use for format-agnostic and multi-sorter workflows. For a Neuropixels-specific Kilosort4 pipeline with PSTH and population decoding, use neuropixels-analysis instead.
📦 Install Skill
Command line install
Install directly with the `skills` CLI.
npx skills add jaechang-hits/SciAgent-Skills/skills/scientific-computing/spikeinterface-electrophysiologyFile Explorer
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